Javascript is browser side scripting, not server side.. so the web server really has nothing to do with JS.

Show me a snipped of the code you are talking about.
It sounds like a simple JS error to me..

the JS in your page should look like this:
Code:

<script type='text/javascript'>
<!--

     function somefunc ()
     {
     // JS function code goes here/
     }

//-->
</script>
 

hope that helps.

rgds

Franki